[File] "ORA compressed FASTQ files" improvement

Christos Zoulas christos at zoulas.com
Sat Dec 24 22:48:04 UTC 2022


Fixed, thanks!

christos

> On Dec 21, 2022, at 2:07 PM, Christoph Biedl <astron.com.bwoj at manchmal.in-ulm.de> wrote:
> 
> Signed PGP part
> Hello,
> 
> as part of my regression checks, I got a strange detection
> 
> | , DNA size 1000033095, read names size 936955016, quality buffer 1 size 2017496961, quality buffer 2 size 67721504
> 
> from one of my files.
> 
> Now looking at
> 
> commit c7d6c180b7e71761e1266e4349e404383bc9f625
> Author: Christos Zoulas <christos at zoulas.com>
> Date:   Sat Oct 15 14:45:49 2022 +0000
> 
>    Add ORA compressed FASTQ files
> 
> +0      uleshort        0x7c49
> +>2     lelong          0x80    ORA FASTQ compressed file
> +>6     ulelong         x       \b, DNA size %u
> (...)
> 
> it seems the third and all the following lines should have a second '>'
> at the start so these rule are not triggered if just by coincidence
> the first two bytes match.
> 
>    Christoph
> 
> 

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